| Title | Season | Episode # | First Aired |
|---|---|---|---|
| Kryptonite Kills | 1 | 12 | January 28, 1989 |
| Lex Luthor, Sentenced to Death | 2 | 2 | October 14, 1989 |
| Little Hercules | 1 | 20 | April 15, 1989 |
| Luthor Unleashed | 1 | 26 | May 27, 1989 |
| Meet Mr. Mxyzptlk | 1 | 16 | February 25, 1989 |
| Metallo | 2 | 3 | October 21, 1989 |
| Metamorphosis | 4 | 20 | May 3, 1992 |
| Microboy | 2 | 15 | January 27, 1990 |
| Mindscape | 3 | 10 | December 8, 1990 |
| Mine Games | 3 | 22 | April 20, 1991 |
| Mr. & Mrs. Superboy | 2 | 8 | November 25, 1989 |
| Mutant | 1 | 21 | April 22, 1989 |
| Neila | 3 | 4 | October 27, 1990 |
| Neila and the Beast | 3 | 13 | January 12, 1991 |
| Nick Knack | 2 | 21 | April 14, 1990 |
| Nightmare Island | 2 | 5 | November 4, 1989 |
| Obituary For a Superhero | 4 | 19 | April 26, 1992 |
| Out of Luck | 4 | 16 | February 23, 1992 |
| Paranoia | 4 | 6 | November 10, 1991 |
| Programmed for Death | 2 | 9 | December 2, 1989 |
| Rebirth Part One | 3 | 17 | February 9, 1991 |
| Rebirth Part Two | 3 | 18 | February 16, 1991 |
| Revenge from the Deep | 2 | 23 | April 28, 1990 |
| Revenge of the Alien Part One | 1 | 13 | February 4, 1989 |
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