| Title | Season | Episode # | First Aired |
|---|---|---|---|
| A Decepticon Raider in King Arthur's Court | 2 | 38 | Thursday October 24, 1985 |
| A Plague of Insecticons | 1 | 16 | Saturday December 29, 1984 |
| A Prime Problem | 2 | 24 | Wednesday October 2, 1985 |
| Aerial Assault | 2 | 57 | Tuesday December 10, 1985 |
| Atlantis, Arise! | 2 | 25 | Thursday October 3, 1985 |
| Attack of the Autobots | 2 | 26 | Friday October 4, 1985 |
| Auto Berserk | 2 | 33 | Wednesday October 16, 1985 |
| Auto-Bop | 2 | 49 | Wednesday November 13, 1985 |
| Autobot Spike | 2 | 17 | Monday September 23, 1985 |
| B.O.T. | 2 | 65 | Thursday January 9, 1986 |
| Blaster Blues | 2 | 37 | Wednesday October 23, 1985 |
| Call of the Primitives | 3 | 91 | Tuesday November 18, 1986 |
| Carnage in C-Minor | 3 | 79 | Tuesday October 14, 1986 |
| Changing Gears | 2 | 23 | Tuesday October 1, 1985 |
| Chaos | 3 | 72 | Tuesday September 30, 1986 |
| Child's Play | 2 | 46 | Thursday November 7, 1985 |
| City of Steel | 2 | 34 | Thursday October 17, 1985 |
| Cosmic Rust | 2 | 61 | Thursday December 26, 1985 |
| Countdown to Extinction | 1 | 12 | Saturday December 1, 1984 |
| Dark Awakening | 3 | 73 | Wednesday October 1, 1986 |
| Day of the Machines | 2 | 30 | Thursday October 10, 1985 |
| Desertion of the Dinobots (1) | 2 | 35 | Monday October 21, 1985 |
| Desertion of the Dinobots (2) | 2 | 36 | Tuesday October 22, 1985 |
| Dinobot Island (1) | 2 | 19 | Wednesday September 25, 1985 |
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