| Title | Season | Episode # | First Aired |
|---|---|---|---|
| The Emperor's Holiday | 2 | 43 | Wednesday April 17, 2002 |
| The End of Mach Storm | 4 | 116 | |
| The Final Battle | 2 | 63 | Thursday May 16, 2002 |
| The First Town | 5 | 123 | |
| The Fog at Mt. Iselina | 1 | 11 | Monday March 4, 2002 |
| The Giant Fortress | 2 | 60 | Monday May 13, 2002 |
| The Gravity Cannon | 2 | 62 | Wednesday May 15, 2002 |
| The Great Sea Battle | 2 | 61 | Tuesday May 14, 2002 |
| The Imperial Ring | 1 | 23 | Wednesday March 20, 2002 |
| The Invisible Enemy | 2 | 39 | Thursday April 11, 2002 |
| The Kid Called Matt | 4 | 98 | Saturday November 1, 2003 |
| The Legendary Zoid | 4 | 117 | |
| The Longest Night of the Republic (2) | 1 | 17 | Tuesday March 12, 2002 |
| The March | 5 | 144 | |
| The Miracle of Zero - The Wind, the Cloud and Adventure (3) | 3 | 93 | Thursday November 29, 2001 |
| The Mountain of Dreams | 1 | 10 | Friday March 1, 2002 |
| The Mysterious Fiona | 1 | 2 | Tuesday February 19, 2002 |
| The New Liger | 1 | 25 | Friday March 22, 2002 |
| The Nightmare | 2 | 57 | Tuesday May 7, 2002 |
| The One Left Behind | 5 | 150 | |
| The Prince Arrives: Harry Champ | 3 | 70 | Thursday October 25, 2001 |
| The Princess Arrives: Mary Champ | 3 | 76 | Friday November 2, 2001 |
| The Protectors | 1 | 4 | Thursday February 21, 2002 |
| The Rampage of the God of Destruction | 4 | 115 |
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